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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901788.1_cds_XP_016451841.1_46144
CDS Infomation

[gene=LOC107776458] [db_xref=GeneID:107776458] [protein=probable glutamate carboxypeptidase 2 isoform X3] [protein_id=XP_016451841.1] [location=join(30388..30808,31979..32493,32819..32886,33189..33270,33393..33485,33606..33758,33978..34061,34195..34282,34374..34457,34905..34954,35064..35180,35351..35470,35572..35754)] [gbkey=CDS]
Sequence

ATGTATAATTTAGCAATTTACACTTTCATAGCCATAGCCACTTCTATTTCCTTTCTTTTC
TTGTCTTCCCCTCCAAAATCCTACTATCACTCTTTATTCATATCTGATTCTTTATCTGAT
AATTCTTCTATAGCAAACAATCTTTACAGTTTAACTAAGAGACCTCATGTTGCTGGTTCT
AAAGCTAATGCTGAAGCAGCAACTTATGTTTTATCAATTCTCAGTTCTTGCAACATAAAA
TCACATGTAACATCCTATGATGTTGCCTTAACTTATCCTGTCTCAAGGTCTTTAATTCTT
ACACCTTCATCTTCAGAAAAACCAATAAAATTTGGTCTTATTCAGGAGATTTATGAAAAC
GATCCATATGCAGATGTTGCAAATGAAGTTTTACCTACTTTCCATGCTTATGCAAGATCA
GGCACGGCAACTGGCCCAGTGGTATATGCAAATTATGGGCGCGTGGAGGACTATGCAACA
TTGTTCGAAATGGGAGTGAATGTATCTAATACTGTTGTATTAGCTAGATATGGAAAAATA
TACAGGGGGGACATTGTACATAATGCTTATGCTGCTGGTGCAATTGGAGTGTTAATCTTT
ACCGATAAAAAGGATTATGGTGGTGTAAAATGGTTTCCGGACGATAAGTGGATGCCTCCA
AGTGGAGTTCAAGTGGGATCAGTGTATGACGGAACGGGTGATCCAACAACACCAGGTTGG
CCTAGTACTGGAGAATGTGAGAGATTAACAAATGAGGAAGTGGATGATTCAGGGAATGTA
CCATTGATACCTTCATTGCCGATTTCTTCGGCTGATGGAGATGCAATCATAAGGACTATT
GGTGGAAAAGAAGCAAATGTGGATTGGCAAGGAGGAAAAGAAAGCCCTATTTATCGAGTA
GGTCCAGGACCTGCAATTGCAAACCTCTCTTATGAAGGACAACAAGTCATAAGCACAATT
CAAAATGTTATTGGAGTTATAGAAGGAGAAGAAGAACCTGATCGGTTTGTTATACTAGGT
AATCATCGTGATGCATGGACATTTGGAGCTGTTGATCCCAATAGTGGCACAGCAGCCCTA
CTCGAGATTGCCCAAAGGCTAGAAAAGCTGCAAAAAAAAGGGTGGAGACCGCGAAGAACA
ATCGTGTTATGCAACTGGGATGCTGAGGAATATGGCCTGATAGGTTCAACAGAATGGGTT
GAAGAAAATAGGGAATTGCTAGCTTCAAGGGTGATTGCATACTTGAACGTCGATTGTGCA
GTTCAAGCGGGACATTTTCGAGCGTCTGCAACCCCACAGCTTGATGAACTAATCATACAA
GTTGCTCAGCAGGTACAAGATCCTGATAACTCCTCACAAACTATCTATCAATCCTGGCTT
GGCTCTGGCAACGATACAACAGTACAGGTGAGAATGCTCGGGAGATTAGGAGGAGCTGGA
TCGGATTACGCGGCATTTGTTCAACACATTGGCATCCCAGCACTTGACCTGTCTTTTGGC
AATGGTTACCCAGTCTACCACTCAATGTATGATGACTTTGTATGGATGAAGAAATTTGGA
GATCCAATGTTTCATAGGCACGTAGCAGATGATGAAGTTTTGCCTTTTAATTACCTAACC
TACGCGTATGAGCTCCAGAAAAGTGCAGAACAGTTGGAAGCTGAAATATCAGTAAATGGC
ATCAAACTTGTTCCCTTGTATGCTTCTATTGAGAAACTCCGAAAAGCAGCCATTAAAATT
GAGGACGACATAAAGGCACTCAAAGCAAAAAGAAGTTGGGAATCAGTGAGAGAGTTGAAC
GACAGACTAATAATGACAGAACGAGCATTCACAGACAAAGACGGGCTTTCCTCAAGAACA
TGGTATAAACATTTGATTTATGCACCAGCAAGGCAGGACGATTATGGATCTAACTCTTTC
CCCGGTGTATCTGATGCTATTGAGAAAGCCAAGAGCCTGAAATCTACAGACTCGTGGCGT
TCTGTACAACATGAAGTTTGGCGAGTTGCTCGTGCCATCACACAAGCATCACTAGTCCTT
AGTGGTCGACTAACGTGA

Peptide Sequence

PEP ID

XP_016451841.1
PEP Infomation

PREDICTED: probable glutamate carboxypeptidase 2 isoform X3 [Nicotiana tabacum]
Sequence

MYNLAIYTFIAIATSISFLFLSSPPKSYYHSLFISDSLSDNSSIANNLYSLTKRPHVAGS
KANAEAATYVLSILSSCNIKSHVTSYDVALTYPVSRSLILTPSSSEKPIKFGLIQEIYEN
DPYADVANEVLPTFHAYARSGTATGPVVYANYGRVEDYATLFEMGVNVSNTVVLARYGKI
YRGDIVHNAYAAGAIGVLIFTDKKDYGGVKWFPDDKWMPPSGVQVGSVYDGTGDPTTPGW
PSTGECERLTNEEVDDSGNVPLIPSLPISSADGDAIIRTIGGKEANVDWQGGKESPIYRV
GPGPAIANLSYEGQQVISTIQNVIGVIEGEEEPDRFVILGNHRDAWTFGAVDPNSGTAAL
LEIAQRLEKLQKKGWRPRRTIVLCNWDAEEYGLIGSTEWVEENRELLASRVIAYLNVDCA
VQAGHFRASATPQLDELIIQVAQQVQDPDNSSQTIYQSWLGSGNDTTVQVRMLGRLGGAG
SDYAAFVQHIGIPALDLSFGNGYPVYHSMYDDFVWMKKFGDPMFHRHVADDEVLPFNYLT
YAYELQKSAEQLEAEISVNGIKLVPLYASIEKLRKAAIKIEDDIKALKAKRSWESVRELN
DRLIMTERAFTDKDGLSSRTWYKHLIYAPARQDDYGSNSFPGVSDAIEKAKSLKSTDSWR
SVQHEVWRVARAITQASLVLSGRLT

Transcript Sequence

Gene sequence data has not been registered.